Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential

Dates

April 10 - 21, 2024

Vessel

Research Vessel F.G. Walton Smith

Location

Around Puerto Rico

Primary goal

Collect marine organisms (e.g., sponges, corals, and microorganisms) that may contain natural products that can be developed into useful pharmaceutical products

Primary technologies

Remotely operated vehicle

Expedition Summary

April 10-21, 2024, a research team led by scientists at Florida Atlantic University’s Harbor Branch Oceanographic Institute (HBOI) explored marine habitats in deepwater areas around Puerto Rico. Using a Mohawk remotely operated vehicle (ROV), they sought out marine organisms (e.g., sponges, corals, and microorganisms) that may contain natural products that can be developed into useful pharmaceutical products.

The Mohawk remotely operated vehicle on the deck of Research Vessel F.G. Walton Smith off the coast of Puerto Rico during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential.
The Mohawk remotely operated vehicle on the deck of Research Vessel F.G. Walton Smith off the coast of Puerto Rico during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Image courtesy of Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Download largest version (jpg, 2.2 MB).
Map showing the locations of remotely operated vehicle dives conducted (red arrows) and originally planned (green dots) for Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential.
Map showing the locations of remotely operated vehicle dives conducted (red arrows) and originally planned (green dots) for Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Map courtesy of Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Download largest version (jpg, 238 KB).

During the expedition, the team conducted 16 successful ROV dives — as many as three a day — to depths that ranged from 70 to 505 meters (230 to 1,657 feet), collecting video, still photos, and samples. Team members included a sponge expert and a coral expert. From their monitors in the ship’s control room, they watched video of the dives, looking for sponges and gorgonian corals, and collecting those that either were different from past collections or that are known to have rich chemistry in the hopes of finding some that have benefits to human health.

Two white sponges seen off northwestern Puerto Rico at a depth of 109 meters (358 feet) during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. The white sponge on the right was collected and is an Aplysina sp. The research team recently found that another species of Aplysina has active compounds that are useful against triple negative breast cancer cells when grown as small tumors. They’re hoping this one has active compounds too!
Two white sponges seen off northwestern Puerto Rico at a depth of 109 meters (358 feet) during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. The white sponge on the right was collected and is an Aplysina sp. The research team recently found that another species of Aplysina has active compounds that are useful against triple negative breast cancer cells when grown as small tumors. They’re hoping this one has active compounds too! Image courtesy of Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Download largest version (jpg, 5.06 MB).
A Spongosorites siliquaria collected off western Puerto Rico at a depth of 84 meters (276 feet) during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Spongosorites sponges are very rich in chemistry. Some contain topsentins, which are potent anti-inflammatory compounds; some have dragmacidin G, a broad-spectrum antibiotic; and others have dragmacidin D, which kills triple negative breast cancer cells when grown as small tumors. The research team is always excited when they see a Spongosorites.
A Spongosorites siliquaria collected off western Puerto Rico at a depth of 84 meters (276 feet) during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Spongosorites sponges are very rich in chemistry. Some contain topsentins, which are potent anti-inflammatory compounds; some have dragmacidin G, a broad-spectrum antibiotic; and others have dragmacidin D, which kills triple negative breast cancer cells when grown as small tumors. The research team is always excited when they see a Spongosorites. Image courtesy of Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Download largest version (jpg, 4.72 MB).
A possible new species of Aplysina sponge collected off western Puerto Rico at a depth of 84 meters (276 feet) during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential.
A possible new species of Aplysina sponge collected off western Puerto Rico at a depth of 84 meters (276 feet) during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Image courtesy of Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Download largest version (jpg, 6.43 MB).
A gorgonian with a brittle star seen off southwestern Puerto Rico at a depth of 366 meters (1,201 feet) during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential.
A gorgonian with a brittle star seen off southwestern Puerto Rico at a depth of 366 meters (1,201 feet) during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Image courtesy of Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Download largest version (jpg, 772 KB).
The pink and green dots in the images above are laser lights from the remotely operated vehicle. The like-colored dots are spaced 10 centimeters (4 inches) apart and are used to estimate the size of an animal.

In total, the team collected 136 samples: 112 sponges, 17 octocorals, 2 stony corals, 2 black corals, and 1 worm, as well as some red and green algae. One of the sponges collected may be new to science, but DNA sequencing will need to be done before we know for sure.

At the end of a dive during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential, the bioboxes on the Mohawk remotely operated vehicle are full of samples to be tested for their biotechnology potential.
At the end of a dive during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential, the bioboxes on the Mohawk remotely operated vehicle are full of samples to be tested for their biotechnology potential. Image courtesy of Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Download largest version (jpg, 7.96 MB).

As soon as the samples were brought to the surface, they were removed from the ROV’s bioboxes, and the processing began. First, the samples were organized and tagged. Then, to avoid contamination that may be introduced later in the processing, samples were "subsampled" (small pieces were taken) for a variety of purposes:

  • All samples were subsampled for DNA archiving and identification.
  • Some sponges were subsampled and then their cells were separated and frozen for HBOI’s sponge biobank.
  • Two samples were subsampled each day for microbial culture (which enables microbes to multiply) for the microbial libraries at HBOI and Mote Marine Lab.

After this initial subsampling, each sample was photographed and then further subsampled for a quick chemistry analysis and a voucher to be stored and made available for future taxonomic studies. Whatever was left of the sample after all the subsampling was frozen for future chemical studies and testing to evaluate their pharmaceutical potential.

Esther Guzmán and Kirstie Francis process a sample in the wet lab on Research Vessel F.G. Walton Smith during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential.
Esther Guzmán and Kirstie Francis process a sample in the wet lab on Research Vessel F.G. Walton Smith during Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Image courtesy of Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Download largest version (jpg, 6.48 MB).

While at sea, the team was also interested in documenting fish, invasive coral, and trash. Unfortunately, they saw very few fish during most dives, which suggested the areas have been overfished. While they did see many invasive lionfish, they didn’t see any invasive corals at the depths they visited.

Despite the many successful collections, the expedition wasn’t all smooth sailing. Prior to departure, the team had difficulties setting expedition dates and getting the required research permits. While at sea, bad weather, seasick teammates, and issues with the ship and the ROV presented anticipated and unanticipated challenges. Yet, through it all, team members persevered: the ship crew worked all night to repair the ship’s engine, the ROV crew operated for most of the expedition without the ability to track the ROV, and the science crew stepped in and helped wherever they could. The exemplary teamwork made for a pleasant expedition and contributed to its success.

The whole shipboard team from Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential, including the science crew, ship crew, and remotely operated vehicle crew.
The whole shipboard team from Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential, including the science crew, ship crew, and remotely operated vehicle crew. Image courtesy of Exploration of Deepwater Habitats off Puerto Rico and the U.S. Virgin Islands for Biotechnology Potential. Download largest version (jpg, 868 KB).

Back on shore, samples and subsamples collected during the expedition have been stored in and will be shared via a suite of long-term repositories to enable future biopharmaceutical research and development. In the near term, select samples are being studied for identification purposes and others are being processed further and will be tested to determine their biotechnological potential. Knowledge gained as a result of this work will contribute to the treatment and prevention of existing and emerging illnesses and diseases.

Meet the Explorers

View all
Esther Guzmán

Esther Guzmán

Principal Investigator/Co-Chief Scientist
Harbor Branch Oceanographic Institute, Florida Atlantic University

John Reed

John Reed

Co-Chief Scientist
Harbor Branch Oceanographic Institute, Florida Atlantic University

Priscilla Winder

Priscilla Winder

Research Scientist
Harbor Branch Oceanographic Institute, Florida Atlantic University

Megan Conkling

Megan Conkling

Research Scientist
Harbor Branch Oceanographic Institute, Florida Atlantic University

Courtney Brooks

Courtney Brooks

Outreach and Marine Education Specialist
Harbor Branch Oceanographic Institute, Florida Atlantic University

Education Content

Education Theme pages provide the best of what the NOAA Ocean Exploration website has to offer to support educators in the classroom related to this project. Each theme page includes expedition features, lessons, multimedia, career information, and associated past expeditions.

Funding for this expedition was provided by NOAA Ocean Exploration via its Ocean Exploration Fiscal Year 2023 Funding Opportunity and NOAA’s Deep Sea Coral Research and Technology Program.

Published July 24, 2024